Using Mass Spectrometers

When used together with the Thermo Finnigan aQa or MSQ Mass Spectrometer, Chromeleon supports MS data acquisition. However, before you can record and process mass spectra, several conditions must be fulfilled. For more information, refer to:

 Creating an MS Program and Sequence

 Creating a PGM File for the MSQ

 Creating MSQ Channels with the MSQ PGM File

 Creating a PGM File for the aQa MS

 Creating aQa MS Channels with the aQa PGM File

 Acquiring MS Data in MCA Mode

 Extracting Mass Traces Online

 Extracting Mass Traces Afterward

 Extracting a Temporary Mass Trace

 Showing Mass Spectra

 Minimizing the Noise of Mass Spectra

 Processing Mass Spectra

 Defining Further QNT Settings for MS